BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023D11SP1|AL428054
(1051 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1541 1884 0.0
>3x_Contig1541
Length = 10565
Score = 1884 bits (948), Expect = 0.0
Identities = 962/964 (99%), Gaps = 2/964 (0%)
Strand = Plus / Plus
Query: 1 acgtcatcccatggccaagagctcttgtcatgtggatcagtcaaatggttgccggtatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 acgtcatcccatggccaagagctcttgtcatgtggatcagtcaaatggttgccggtatgg 963
Query: 61 ctgctgcaggtgctgcttctgccatgaccccaggtgaaatcttattcgctaacggtctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 ctgctgcaggtgctgcttctgccatgaccccaggtgaaatcttattcgctaacggtctag 1023
Query: 121 gtggtggtgcttccagatccagaggtgttttcttggaagccttcggtaccgcaatcctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 gtggtggtgcttccagatccagaggtgttttcttggaagccttcggtaccgcaatcctat 1083
Query: 181 gtaccaccgttttgttcatggccgttgaaaagcataaggctaccccaatggctccattcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 gtaccaccgttttgttcatggccgttgaaaagcataaggctaccccaatggctccattcg 1143
Query: 241 ccattggtattgcattgtttgttggtcacttgatctgtgtttactacaccggtgccggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 ccattggtattgcattgtttgttggtcacttgatctgtgtttactacaccggtgccggtt 1203
Query: 301 tgaacccagccagatctttcggtccatgtatcgctgctgcctctttccctaactaccatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 tgaacccagccagatctttcggtccatgtatcgctgctgcctctttccctaactaccatt 1263
Query: 361 ggatttactggattggtccaggtcttggtgccatcatgtctgccgctttgtggcacatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1264 ggatttactggattggtccaggtcttggtgccatcatgtctgccgctttgtggcacatct 1323
Query: 421 tgaagttcttgaattatgagaactgtaacccaggtcaagatgatatcctataatttcaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1324 tgaagttcttgaattatgagaactgtaacccaggtcaagatgatatcctataatttcaac 1383
Query: 481 atcctgcaattggttaaaagaaagagacataataaaaatataggattcaaagagatgcgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1384 atcctgcaattggttaaaagaaagagacataataaaaatataggattcaaagagatgcgt 1443
Query: 541 gacgcatgatctcattgaggtcgaattactcgaaggacagacaatccttgaaaaggacaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1444 gacgcatgatctcattgaggtcgaattactcgaaggacagacaatccttgaaaaggacaa 1503
Query: 601 agaatggacagtgaaaaaaaaaaaaaaagcttggagctattcgcatcaggaccccttcca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1504 agaatggacagtgaaaaaaaaaaaaaaagcttggagctattcgcatcaggaccccttcca 1563
Query: 661 ctcaccacactcctcgctcacctccgtcaagcttacacataatgatattaacatcaataa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 ctcaccacactcctcgctcacctccgtcaagcttacacataatgatattaacatcaataa 1623
Query: 721 taacactagtaataatcataatatcttaatactaattaaataagaaataatttcacaaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1624 taacactagtaataatcataatatcttaatactaattaaataagaaataatttcacaaca 1683
Query: 781 tcaaacgctaatatcaaacttgtgccaaacactcactgattgttttctcaaggaactttc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1684 tcaaacgctaatatcaaacttgtgccaaacactcactgattgttttctcaaggaactttc 1743
Query: 841 tcaattgataacgcatgaataaatactaattgtatttccatgcggtgccttgcatagaag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1744 tcaattgataacgcatgaataaatactaattgtatttccatgcggtgccttgcatagaag 1803
Query: 901 aacctgaatggtcgagctaatgtcg-agaaataagcctggaccctggct-caaactgtac 958
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 1804 aacctgaatggtcgagctaatgtcgaagaaataagcctggaccctggctccaaactgtac 1863
Query: 959 ggat 962
||||
Sbjct: 1864 ggat 1867
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,495
Number of Sequences: 1807
Number of extensions: 16495
Number of successful extensions: 2242
Number of sequences better than 1.0e-20: 1
length of query: 1051
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1035
effective length of database: 10,329,639
effective search space: 10691176365
effective search space used: 10691176365
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)